Three new papers on properties of modified RNA’s now out in print!
Sri and Sweta have recently published 3 papers on properties of modified RNAs in N.A.R and Chem. Comm. in collaboration with Jia Sheng. Congrats!
PNAS: High-resolution reversible folding of hyperstable RNA tetraloops using molecular dynamics simulations
PNAS: High-resolution reversible folding of hyperstable RNA tetraloops using molecular dynamics simulations We report the de novo folding of three hyperstable RNA tetraloops to 1–3 Å rmsd from their experimentally determined structures using molecular dynamics...
JMB: Molecular Simulation Studies of Monovalent Counterion-Mediated Interactions in a Model RNA Kissing Loop
Molecular Simulation Studies of Monovalent Counterion-Mediated Interactions in a Model RNA Kissing Loop Alan A. Chen, David E. Draper, Rohit V. Pappu; J. Mol. Biol. ABSTRACT: A kissing loop is a highly stable complex formed by loop–loop base-pairing...
JACS: The essential role of stacking adenines in a two-base-pair RNA kissing complex
JACS: The essential role of stacking adenines in a two-base-pair RNA kissing complex
PNAS: Mechanism of enhanced mechanical stability of a minimal RNA kissing complex elucidated by nonequilibrium molecular dynamics simulations
PNAS: Mechanism of enhanced mechanical stability of a minimal RNA kissing complex elucidated by nonequilibrium molecular dynamics simulations
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