by alan | Feb 26, 2014 | News
Now that the lab has officially opened, we are off to a great start! Our PNAS paper on RNA folding was featured in a special commentary in PNAS, and was recommended by Faculty of 1000! Plus, we have two new additions to our lab: Paul Gasper, Ph.D has joined as the...
by alan | Sep 16, 2013 | Publications
PNAS: High-resolution reversible folding of hyperstable RNA tetraloops using molecular dynamics simulations We report the de novo folding of three hyperstable RNA tetraloops to 1–3 Å rmsd from their experimentally determined structures using molecular dynamics...
by alan | Sep 16, 2013 | News
Our tetraloop folding/RNA force field paper is finally out in print in PNAS early edition!!! This has been a long time coming. RPI has been nice enough to interview us and write a Press Release featuring this work! Press “read more” below for the...
by alan | Jun 5, 2013 | News
Welcome to Tony Hoang, who has just joined the lab as a Ph.D student at SUNY Chemistry. Tony has an M.S. in computational chemistry from Indiana University Pennsylvania and a B.S. in chemistry from the University of Minnesota. Tony will be working on QM studies of...
by alan | Apr 20, 2013 | Publications
Molecular Simulation Studies of Monovalent Counterion-Mediated Interactions in a Model RNA Kissing Loop Alan A. Chen, David E. Draper, Rohit V. Pappu; J. Mol. Biol. ABSTRACT: A kissing loop is a highly stable complex formed by loop–loop base-pairing...
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